In addition to the server routes table being changed, FAOR is also included on the server airports table with full airport details, lat/long etc so the org/destination lines should be there as well but as Rod states until the next Navdata is published to get the line to show, FAJS will require to be changed to FAOR in the routes table on your computer
As stated, FAJS will still remain on the map as there is nothing I can do about it.
Alan